Summary Statistics

Plots

Histogram of read lengths

Histogram of read lengths after log transformation

Weighted Histogram of read lengths

Weighted Histogram of read lengths after log transformation

Dynamic histogram of Read length

Yield by length

Read lengths vs Average read quality plot using dots

Read lengths vs Average read quality plot using a kernel density estimation

Read lengths vs Average read quality plot using dots after log transformation of read lengths

Read lengths vs Average read quality plot using a kernel density estimation after log transformation of read lengths

Number of reads generated per channel

Cumulative yield

Cumulative yield

Number of reads over time

Number of active pores over time

Violin plot of read lengths over time

Violin plot of quality over time

Violin plot of sequencing speed over time

Cumulative yield

Cumulative yield

Number of reads over time

Number of active pores over time

Violin plot of log read lengths over time

Violin plot of quality over time

Violin plot of sequencing speed over time

NanoPlot report

Summary statistics

feature
General summary
Active channels 427.0
Mean read length 4,288.6
Mean read quality 8.4
Median read length 2,378.0
Median read quality 9.0
Number of reads 3,188,748.0
Read length N50 8,288.0
Total bases 13,675,325,204.0
Number, percentage and megabases of reads above quality cutoffs
>Q5 2914296 (91.4%) 13099.5Mb
>Q7 2609345 (81.8%) 12057.8Mb
>Q10 459829 (14.4%) 2403.7Mb
>Q12 24 (0.0%) 0.0Mb
>Q15 0 (0.0%) 0.0Mb
Top 5 highest mean basecall quality scores and their read lengths
1 12.4 (416)
2 12.4 (481)
3 12.3 (1597)
4 12.2 (1817)
5 12.2 (451)
Top 5 longest reads and their mean basecall quality score
1 114740 (7.9)
2 106965 (7.6)
3 105071 (7.5)
4 104073 (7.9)
5 101443 (7.7)

Plots

Histogram of read lengths





Histogram of read lengths after log transformation





Weighted Histogram of read lengths





Weighted Histogram of read lengths after log transformation





Dynamic histogram of Read length





Yield by length





Read lengths vs Average read quality plot using dots





Read lengths vs Average read quality plot using a kernel density estimation





Read lengths vs Average read quality plot using dots after log transformation of read lengths





Read lengths vs Average read quality plot using a kernel density estimation after log transformation of read lengths





Number of reads generated per channel





Cumulative yield





Cumulative yield





Number of reads over time





Number of active pores over time





Violin plot of read lengths over time





Violin plot of quality over time





Violin plot of sequencing speed over time





Cumulative yield





Cumulative yield





Number of reads over time





Number of active pores over time





Violin plot of log read lengths over time





Violin plot of quality over time





Violin plot of sequencing speed over time